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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_06988.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
WRKY |
Protein Properties |
Length: 492aa MW: 55212.5 Da PI: 7.1042 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_06988.1_g00004.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 89.8 | 2.2e-28 | 79 | 137 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEE.ES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitY.egeHnhek 60
dDgy+WrKYGqK+vkgs++prsYY+Ct+++Cpv+kkve++ ++v+ei+Y +g Hnh+k
Sme2.5_06988.1_g00004.1 79 DDGYTWRKYGQKHVKGSNYPRSYYKCTQQNCPVRKKVECAP-SGQVTEIVYiNGAHNHPK 137
8****************************************.9********669****85 PP
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2 | WRKY | 105.8 | 2.2e-33 | 280 | 337 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+vkg+++prsYY+CtsagC v+k+ver+++d k v++tYeg+Hnhe
Sme2.5_06988.1_g00004.1 280 EDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCLVRKHVERASDDLKSVITTYEGKHNHE 337
8********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 492 aa
Download sequence Send
to blast |
MSSSPCRTEF LTIPPGISPA ALLDSPFMLP SSMIPTENGT QILNCIESRK NEIPQQEEEF 60 IKKRRGIFSA GISPNNSSDD GYTWRKYGQK HVKGSNYPRS YYKCTQQNCP VRKKVECAPS 120 GQVTEIVYIN GAHNHPKTQN LRRKTTDDSY VVSQENGSSI WRNDQKFEHN EDIAGCNELE 180 RLSSASVLSD VSDPMLSNNL KSNESNGTHE LSPTLTIFDG EDEDLATQEG YFLGDGIDEY 240 ELESKRRKKD DCLAEPSLLS RTVREPKVVL QVASEIDILE DGYRWRKYGQ KVVKGNPNPR 300 SYYKCTSAGC LVRKHVERAS DDLKSVITTY EGKHNHEVPS ANKTNGVSGN VRSASMLNNG 360 QQTCTTTSRK SLKDSNIRVQ FQDLPIPFER KHFMGSEYLR PSFGASYLGD LSFGASSLQL 420 PDFPLPLPLP SRLSFPARQN EPRLGDFHLN NHFLLPNGAS NPFLADGNTQ HINNDSNNSR 480 LLKAKDETQY WT
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