 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_06423.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
WRKY |
| Protein Properties |
Length: 273aa MW: 29442.1 Da PI: 4.8335 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_06423.1_g00002.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 36.4 | 1.1e-11 | 169 | 190 | 2 | 23 |
--SS-EEEEEEE--TT-SS-EE CS
WRKY 2 dDgynWrKYGqKevkgsefprs 23
+Dgy+WrKYGqK vk+s+fpr+
Sme2.5_06423.1_g00002.1 169 EDGYRWRKYGQKAVKNSPFPRG 190
8*******************95 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MDDNKDKVDD PLLPGAEFPG AGAESSWSLG GDDESDNVYF FGTGSNRDTG ILTEFGWNFQ 60
PAGDRDGGGG FDRIEKDLAG NISTTNTPSV PESTSTATEP TTAAAGKITD EPVSSSCSDD 120
PPEKSTASGG SSASRPPSDT ASKVKKKGQK RIRQPRFAFM TKSEVDHLED GYRWRKYGQK 180
AVKNSPFPRG GLINHEAFTS QLTPLPSQFY HPSGVQYPHD QLVVPHAPES RTMPGETRPE 240
ARRLTETSQL DATQQPTDEG LLGDIVPPGM RNR
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT013933 | 1e-119 | BT013933.1 Lycopersicon esculentum clone 132931F, mRNA sequence. |
