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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sme2.5_05959.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
YABBY |
| Protein Properties |
Length: 161aa MW: 18081.4 Da PI: 8.4881 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_05959.1_g00001.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 63.7 | 7.4e-20 | 2 | 46 | 2 | 46 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsll 46
+ ++sse++Cyv+CnfCnt+lav++P++ ++ +vtv+CGhC++l
Sme2.5_05959.1_g00001.1 2 EFVQSSEHLCYVHCNFCNTVLAVEIPYKRIMDTVTVKCGHCSNLS 46
67899*************************************984 PP
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| 2 | YABBY | 102 | 1.3e-31 | 56 | 145 | 73 | 163 |
YABBY 73 eelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaak 158
+ +++++++ + ++ +++ + ss s++++ +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaak
Sme2.5_05959.1_g00001.1 56 GQCFDHQSTFQGYCSEFKNKGQASSS-ASSTSSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAENPEIPHREAFSAAAK 140
55555666666666665555555555.4488899999************************************************* PP
YABBY 159 nWahf 163
nWa +
Sme2.5_05959.1_g00001.1 141 NWARY 145
***76 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 161 aa
Download sequence Send
to blast |
MEFVQSSEHL CYVHCNFCNT VLAVEIPYKR IMDTVTVKCG HCSNLSFLST RPPIQGQCFD 60
HQSTFQGYCS EFKNKGQASS SASSTSSEPL SPKAPFVVKP PEKKHRLPSA YNRFMKEEIQ 120
RIKAENPEIP HREAFSAAAK NWARYIPNPP NGSLTENANN V
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| Functional Description ? help
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| Source |
Description |
| UniProt | Regulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}. |
