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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_05942.1_g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
bZIP |
Protein Properties |
Length: 146aa MW: 16778.8 Da PI: 8.47 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_05942.1_g00005.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.9 | 1.4e-10 | 34 | 75 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
++ +r+++NRe+Ar sR RK++ ++ L L +eN +
Sme2.5_05942.1_g00005.1 34 RKRKRMISNRESARGSRMRKQKHLDDLMSQLSHLRNENNQIL 75
6789**********************************8754 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MASSIGTSSG SGSGSYTLQN SRSEEDLQRV MDERKRKRMI SNRESARGSR MRKQKHLDDL 60 MSQLSHLRNE NNQILRSMSV TTQNYLNIEA ENSILRARLS ELRHTLQSLT QIISVLNYNT 120 LIESFTADES CNYMDHPIMT ADIMQY
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 33 | 54 | RKRKRMISNRESARGSRMRKQK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}. |