PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_05928.1_g00003.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family EIL
Protein Properties Length: 460aa    MW: 52370.9 Da    PI: 5.3809
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_05928.1_g00003.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3216.81.5e-66149343138353
                              TS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHH CS
                     EIN3 138 elqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptiee 223
                              elqDTtl+S+Lsalmqhc p qrrfple+g++pPWWPtG+elwwg +gls++qg+ppy+kph lkkawkvsvL+a +khms ++ +
  Sme2.5_05928.1_g00003.1 149 ELQDTTLSSILSALMQHCIPLQRRFPLERGLAPPWWPTGNELWWGDQGLSQQQGPPPYRKPHGLKKAWKVSVLAAIVKHMSLDLGR 234
                              8************************************************************************************* PP

                              HHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXX CS
                     EIN3 224 irelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrk 309
                              +r+l+ qsk lq+km+ake+ ++++v+nqee+                +++++s++++ +++ k+e+   +v   k       ++k
  Sme2.5_05928.1_g00003.1 235 MRRLVKQSKNLQNKMTAKETSTWSKVINQEEA---------------LRSLKISTSKEGENKDKEEEL--DVDFPKM---WRKNDK 300
                              ******************************97...............457889999888888666666..4555554...778889 PP

                              XXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
                     EIN3 310 rkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                              rk    e+  v+ ++v + cq+ ++++se +l+f dkns+ ++e
  Sme2.5_05928.1_g00003.1 301 RK-SIFEDDHVNMEDVLYACQNLNCPQSELALGFVDKNSRIEHE 343
                              98.777888888899************************98886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF011901.7E-1731112No hitNo description
PfamPF048731.8E-56148265No hitNo description
Gene3DG3DSA:1.10.3180.103.2E-61148269IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.49E-54149268IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MAKFIAFFVI FLVLFASNTN GSSNFMDTFL VVGKVYCDTC RCGFETSASK YLPGSRVRIE  60
CKKRDTNDLS YTIEGVTNSK GEYKILVNSD RNDEFCDVVL IRSSDSTCAD PNMGRDRARV  120
VLTRNNGMVK IMEVCKGHGF VYGIVSEKEL QDTTLSSILS ALMQHCIPLQ RRFPLERGLA  180
PPWWPTGNEL WWGDQGLSQQ QGPPPYRKPH GLKKAWKVSV LAAIVKHMSL DLGRMRRLVK  240
QSKNLQNKMT AKETSTWSKV INQEEALRSL KISTSKEGEN KDKEEELDVD FPKMWRKNDK  300
RKSIFEDDHV NMEDVLYACQ NLNCPQSELA LGFVDKNSRI EHESSCSCGK RLSDQNNLES  360
TYGHDEEQLN NFSSYLIGAQ MKSQEEMEII TIQQDFGNYH AQTSSHGVVE NFGNFWDNEN  420
ILEELNYGNM NSSNETPSQD VLNHEVAISI WDLDCDDSYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-561482677126Protein ETHYLENE INSENSITIVE 3
4zds_B1e-561482677126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754441e-137HG975444.1 Solanum pennellii chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016553467.11e-171PREDICTED: LOW QUALITY PROTEIN: putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A1U8F2741e-170A0A1U8F274_CAPAN; LOW QUALITY PROTEIN: putative ETHYLENE INSENSITIVE 3-like 4 protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-76EIL family protein