 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_05897.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
NF-YA |
| Protein Properties |
Length: 142aa MW: 16158.4 Da PI: 8.6713 |
| Description |
NF-YA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_05897.1_g00002.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CBFB_NFYA | 59 | 1.5e-18 | 94 | 137 | 3 | 47 |
CBFB_NFYA 3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhA 47
p+YVN KQy++IlkRRq Rak ++++kl k+rkpylheSR +
Sme2.5_05897.1_g00002.1 94 PIYVNVKQYSAILKRRQVRAKRQAQNKL-VKNRKPYLHESRVQYS 137
9***************************.************8865 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 142 aa
Download sequence Send
to blast |
MIEVSTPQLV EGHDHPLSEV IEVSNPQLVD DLPPLSEPQV HHDHPTACLS YPWADTDFGR 60
LVATYGSNAI IYPQMVGVTS TRVALPLECT ESLPIYVNVK QYSAILKRRQ VRAKRQAQNK 120
LVKNRKPYLH ESRVQYSDKS RR
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ865409 | 1e-154 | KJ865409.1 Capsicum annuum cultivar CMS line FS4401 mitochondrion, complete genome. |
| GenBank | KJ865410 | 1e-154 | KJ865410.1 Capsicum annuum cultivar Jeju mitochondrion, complete genome. |
