PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_05784.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family VOZ
Protein Properties Length: 491aa    MW: 55440.8 Da    PI: 6.2503
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_05784.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ412.95.8e-1272134321217
                      VOZ   1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecega 83 
                              pppsaflgpkcalwdc+rpa gs+w+   qdycs +ha+la neg pg  pv+rp gi+lkd+llf+alsak+ gkevg+pecega
  Sme2.5_05784.1_g00002.1 213 PPPSAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYPGRPPVVRPMGIGLKDNLLFQALSAKALGKEVGVPECEGA 298
                              89***********************944459******************************************************* PP

                      VOZ  84 atakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhl 169
                              atakspwna+elfdl+++ege irewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp++++ewhl
  Sme2.5_05784.1_g00002.1 299 ATAKSPWNAPELFDLKVVEGEIIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQMMNEFGGLKRSYYMDPQPMKNLEWHL 384
                              ************************************************************************************** PP

                      VOZ 170 yeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                              yeyein++da+alyrlelklvd+kk +kgk+++ s+adlqk++grlta
  Sme2.5_05784.1_g00002.1 385 YEYEINKYDACALYRLELKLVDGKKIPKGKITNVSVADLQKQMGRLTA 432
                              **********************************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MRKVLKRGAC KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRTYDVGL LEEQVHQMLR  60
EWKSELNEPM FEHMSIESDQ SHYFSRKTGG SHVSSSVDIY RLLLGEEEDD ATSGLAAPKP  120
EPDAQKVSII GFQEGYNVTQ VQQQQGFQLA DQCKGLPLMV NNAGVNVNSL GIATQLDYHS  180
FDLHQEYEQQ YLPGFDALNL YLEDAMPPIH VSPPPSAFLG PKCALWDCPR PAMGSDWCQK  240
SQDYCSDYHA SLAPNEGYPG RPPVVRPMGI GLKDNLLFQA LSAKALGKEV GVPECEGAAT  300
AKSPWNAPEL FDLKVVEGEI IREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQMM  360
NEFGGLKRSY YMDPQPMKNL EWHLYEYEIN KYDACALYRL ELKLVDGKKI PKGKITNVSV  420
ADLQKQMGRL TAEFPLDNKR TVKGRAKANL KNVGNIHAAP VPIVPTCEGF DYGNTDPYDY  480
LMDDLDGYFI T
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0145160.0BT014516.1 Lycopersicon esculentum clone 133906R, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015056070.10.0transcription factor VOZ1
RefseqXP_015056071.10.0transcription factor VOZ1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A3Q7J7010.0A0A3Q7J701_SOLLC; Uncharacterized protein
STRINGSolyc10g008880.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28182454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]