 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_05446.1_g00006.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
GRAS |
| Protein Properties |
Length: 159aa MW: 18744.5 Da PI: 5.1728 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_05446.1_g00006.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 48.8 | 1.2e-15 | 7 | 109 | 109 | 209 |
GRAS 109 e.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvakrl.edl 189
+ +++Hi+D+d++ G+QWp++++a+ ++ l+ T + + e++ ++ + ee+++rL ++A+ +g++++ + +++++l ++l
Sme2.5_05446.1_g00006.1 7 DvQTIHIVDYDMGRGIQWPPIIEAMGQKG---KALKFTSIRKTEEEstgDQWRFEEMKKRLVDYANPFGLTLQVEEMTVEELaSEL 89
4489**********************974...4699999998777677899************************99665441455 PP
GRAS 190 eleeLrvkpgEalaVnlvlq 209
+ + r k+ E l+ n+
Sme2.5_05446.1_g00006.1 90 TRMKKRGKKSEFLVFNWLQG 109
55555666699999999765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MEAIPDDVQT IHIVDYDMGR GIQWPPIIEA MGQKGKALKF TSIRKTEEES TGDQWRFEEM 60
KKRLVDYANP FGLTLQVEEM TVEELASELT RMKKRGKKSE FLVFNWLQGM RVSKENLLQA 120
KEVVNERETP FRVRIEEERQ YEIVLEWKGT SLARVSTWM
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975448 | 9e-48 | HG975448.1 Solanum pennellii chromosome ch09, complete genome. |
