|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_05422.1_g00004.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
Family |
bZIP |
Protein Properties |
Length: 338aa MW: 38384.2 Da PI: 7.9587 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_05422.1_g00004.1 | genome | EGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 25.2 | 3.6e-08 | 201 | 242 | 15 | 56 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
+A rsR RK++ i+eLe+ v+ L+ae ++L ele l ++
Sme2.5_05422.1_g00004.1 201 QSAHRSRVRKLQHIAELERTVQPLQAEGSELSAELEFLDQQN 242
69**********************************998876 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MESSNGSSNL ENFSFANKQS ILDTTSPFLQ SYVVDSNMDV SKGKAKPAEG SSHHHRCNSE 60 SFLIEEQPSW LDELLNEPPE VTTVVPKGHR RSTSDTFAYL GAAAERLNTW EESKNRNVNV 120 GASWGSVNYA SYKDLSAVSF DTKPNSSHEQ KFNKESNGAP SVSHEKHNMR EKNQEGSSER 180 SNNAQAKHSM SKADAKRAKQ QSAHRSRVRK LQHIAELERT VQPLQAEGSE LSAELEFLDQ 240 QNIILSMENR ALRQRLDSLS QEQLIKHLEQ EMLERELTRL QTVYQMQRQQ QHQQPQQQNH 300 SKHRRNKSRD LEGQFANLSI KNDEASSSRV QATGSVRM
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | HG975450 | 1e-165 | HG975450.1 Solanum pennellii chromosome ch11, complete genome. |