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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_05234.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
C3H |
Protein Properties |
Length: 412aa MW: 44480.7 Da PI: 7.743 |
Description |
C3H family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_05234.1_g00003.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-CCCH | 17.9 | 5.3e-06 | 33 | 44 | 14 | 25 |
--TTTTT-SS-S CS
zf-CCCH 14 tCkyGdrCkFaH 25
C+yG+rCkF H
Sme2.5_05234.1_g00003.1 33 SCQYGERCKFLH 44
6*********** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 412 aa
Download sequence Send
to blast |
MSFRVKEYDW WLTKWVENCG VSISNPNEGR NTSCQYGERC KFLHAAQQQP KPNPFGFGSQ 60 STNFQSTNMQ QTKPNPFGFG VQSNSQPRGS NDLGLKQNQY KPFENKWTRS ASANSSSSRQ 120 ADNQPVAPTH ICTDAESCRR QIVEDFNNEK PLWLLTCYGH RKNGPCDITG DVSYEELRAA 180 AYDDAKRGQS LISIVERERS MVNSKVAEFE NLLRNPYAST STSAPTAQSP FPGIRGAQSP 240 FPGATPSAQS PFPGATPSAQ SPFPEVNPGA STPPTSTFGQ PSLLGNSFKT SNSSGANAFS 300 FGNTSASGSF GFGTQVPAHS YQNPSTPSNV SASSGRNLFS TSTTAPPFAN PSGGQLPTPS 360 QGLFPAMTSP VSISLTNSAS PEDFTGDNSI WTKKEWKIGE IPEEAPPDRY VY
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