 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_05091.1_g00003.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
Family |
LBD |
Protein Properties |
Length: 290aa MW: 32710.8 Da PI: 6.7081 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_05091.1_g00003.1 | genome | EGD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 138.7 | 2.1e-43 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+CaaCk+lrrkC+++Cv+apyfp +qpkkf+nvhk+FGasnv+kll++l+ ++reda++sl+yeAe r+rdPvyG+vg+i+ lq++
Sme2.5_05091.1_g00003.1 7 PCAACKFLRRKCTQECVFAPYFPPDQPKKFENVHKVFGASNVTKLLNELNASQREDAVNSLAYEAEYRLRDPVYGCVGLISILQHR 92
7************************************************************************************* PP
DUF260 87 leqlkaelallkee 100
l+q++++l +k+e
Sme2.5_05091.1_g00003.1 93 LKQVQEDLLNAKKE 106
*******9988876 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009954 | Biological Process | proximal/distal pattern formation |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0048441 | Biological Process | petal development |
Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DQPKKFENVH KVFGASNVTK LLNELNASQR 60 EDAVNSLAYE AEYRLRDPVY GCVGLISILQ HRLKQVQEDL LNAKKELATY IGPQAMLPIL 120 QPSGYIQPHP NNPSSSTMMP YNMQPMGLPT GMQQLMIRDP QQQNQQQVIE AHQLAAVMAA 180 REQQEMMRTY EQQQHQFNSG FDSAGPVTAT GFHQMSSSVS PSLALASFES DPYQIQQTQQ 240 EQHRGQVQIQ VQPHQLLQQQ QQQQLPQQPQ TPQQQQSAKS EEERSIGPSC
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Controls the proximal-distal patterning in petals and the adaxial-abaxial determination of leaves. Involved in the repression of the homeobox gene BP. {ECO:0000269|PubMed:12787254, ECO:0000269|PubMed:15821980}. |