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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_04792.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
C2H2 |
Protein Properties |
Length: 188aa MW: 21107.3 Da PI: 5.2967 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_04792.1_g00004.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 15.2 | 6.3e-05 | 31 | 53 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
ykC+ C++ Fs+ L H++ H
Sme2.5_04792.1_g00004.1 31 YKCSFCKRDFSNAQALGGHMNIH 53
9********************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MENDIPNSSN SKKYQITWGS NGGMISQVKS YKCSFCKRDF SNAQALGGHM NIHRKDRAKL 60 REISIETSDI QKHVSPSLPD HVQAPSNIDE SILQQDISSD DMSSPSKRPC VTLEEQQQHQ 120 HHHSISKGKD ENHEGDLLQL PLFVDSPSKE EINCVETQEG NNKDMELSVD DSKLDLELRL 180 GPESSIKP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975448 | 1e-117 | HG975448.1 Solanum pennellii chromosome ch09, complete genome. |