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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_04124.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
MYB |
| Protein Properties |
Length: 320aa MW: 35629.9 Da PI: 6.7091 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_04124.1_g00002.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHH.TTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkq.lGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+lv+++k +G g+W++ ++ g+ R++k+c++rw +yl
Sme2.5_04124.1_g00002.1 14 KGPWTPEEDEKLVEYIKNnHGHGSWRSLPHLAGLARCGKSCRLRWTNYL 62
79**************8537888************************97 PP
|
| 2 | Myb_DNA-binding | 47 | 5.9e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++ eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l
Sme2.5_04124.1_g00002.1 68 RGPFSHEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113
89********************.*********.************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MGRTPCCDKK GLKKGPWTPE EDEKLVEYIK NNHGHGSWRS LPHLAGLARC GKSCRLRWTN 60
YLRPDIKRGP FSHEEEKLVI QLHGILGNRW AAIASQLPGR TDNEIKNLWN THLKKRLLSM 120
GIDPQTNEPN SAPDGVLISP PTSLASRHMA QWESARLEAE ARLSRGSKLL VPSSVGRSGT 180
DCFLRIWNSE VGEAFRKFNK KEGRTTCESS ASQASSSTKY GSVSGITTEI DLSFAANQND 240
DTEWKKSQPW MEDVLKGYED TCSSSGLEDS SESALQLLLD FPSNNDLSFL GQSDTYSLYP 300
EFLSESSFKC SPAEHELGFV
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}. |
