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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_03997.1_g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
WRKY |
Protein Properties |
Length: 448aa MW: 48806.6 Da PI: 8.6973 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_03997.1_g00007.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 92.2 | 3.9e-29 | 142 | 200 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY Ct +gC+v+k+ver+ p+ v++tY g+ nh+
Sme2.5_03997.1_g00007.1 142 LDDGYRWRKYGQKVVKGNPNPRSYYNCTNPGCNVRKHVERAPFKPTSVITTYDGKQNHN 200
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 448 aa
Download sequence Send
to blast |
MQLDNVDPTG TRLNNQLALK TIQQGPTAGG LEGKNDSFET TSLANLHAEY CRGSTTLHSS 60 TAQLGSADAN DISSTFPNNE VDHGTRGNVS LDCNDEGDES ESKIRRIERS STDTSGTRRS 120 IRERSIREPR IVVQTTSEVD LLDDGYRWRK YGQKVVKGNP NPRSYYNCTN PGCNVRKHVE 180 RAPFKPTSVI TTYDGKQNHN VPLIYCQTSV ITTYDGKQNH NVPAERSSNQ ANSDASNSRS 240 KPRTTNAQGH AGRTEPTQVQ NSRKRYGRAP SFDPTSQFNS SGTNQQQGLT GHAMTGFNSD 300 QRQFSAPADS SGTNQQQGLT GHAMTGFNSD QRQFSAPADS SGTNQQQGLT GHAMTGFNSD 360 QRQFSAPAHS SGTKQQQSLT GHAMTGFNSD QRQFSAPADS SGTNQQQSLT GHAMTRFSSH 420 QHQFSAPAHT YPGRPQPVND AGFMLPER
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