 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_03973.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
DBB |
| Protein Properties |
Length: 346aa MW: 37820.9 Da PI: 6.167 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_03973.1_g00001.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 17.3 | 1e-05 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
C+ +e e++ C ++ lC +C ++ H H++vpl
Sme2.5_03973.1_g00001.1 4 QCNVCEVAEANVLCCADEAALCWSCDEKVHAAnklaskHQRVPL 47
7*****999*********************66899999999986 PP
|
| 2 | zf-B_box | 18.6 | 3.8e-06 | 115 | 139 | 15 | 37 |
zf-B_box 15 qlfCedCqqllCedClleeHkg..H 37
+fC +++ llC++C ++H H
Sme2.5_03973.1_g00001.1 115 YFFCLEDRALLCRKCDIAIHTAnpH 139
69******************55674 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MKIQCNVCEV AEANVLCCAD EAALCWSCDE KVHAANKLAS KHQRVPLSGS SSSMPMCDIC 60
QVNLMDSVDI GANDSVAVRY GLHMACGELV YRFLMLNYGI PASFIWQSFC ETVGYFFCLE 120
DRALLCRKCD IAIHTANPHV AVHQRFLLTG VKVGLEPVDP GGASSSGTSQ SIQKVSEPKS 180
APLSKRNPPL SLDNQFNKVP HHASGVGDFA PTKSPFAGGS AAGNEFLGLH FFKSEVWVQW 240
MTDHLSACIK IYQADNGKLG ESDSSSILRF EDEELDGDEC LGQVPDTSWA VPQVPSPPTA 300
SGLYWPKTYQ NPFDSTVFVP DISYSLSSSL QQQPPSGTRL KRRRRY
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975446 | 1e-131 | HG975446.1 Solanum pennellii chromosome ch07, complete genome. |
