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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_03842.1_g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
NAC |
Protein Properties |
Length: 345aa MW: 39035.1 Da PI: 9.2834 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_03842.1_g00008.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 167.8 | 3.7e-52 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
lppGfrF Ptdeel+v+yL+kkv+g++++l ++i e+d+yk++Pw Lp+k++ +ekewyfFs+rd+ky++g+r+nr++ +gyWkat
Sme2.5_03842.1_g00008.1 14 LPPGFRFYPTDEELLVQYLCKKVAGHDFPL-QIIGEIDLYKFDPWVLPSKATFGEKEWYFFSPRDRKYPNGSRPNRVAGTGYWKAT 98
79****************************.89***************988899******************************** PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
g+dk ++s +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
Sme2.5_03842.1_g00008.1 99 GTDKVITS-QGRKVGIKKALVFYVGKAPKGSKTNWIMHEYRL 139
*******9.9999***************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0055114 | Biological Process | oxidation-reduction process |
GO:0005634 | Cellular Component | nucleus |
GO:0000721 | Molecular Function | (R,R)-butanediol dehydrogenase activity |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MGVQEKDPLL QLSLPPGFRF YPTDEELLVQ YLCKKVAGHD FPLQIIGEID LYKFDPWVLP 60 SKATFGEKEW YFFSPRDRKY PNGSRPNRVA GTGYWKATGT DKVITSQGRK VGIKKALVFY 120 VGKAPKGSKT NWIMHEYRLF EPSRKNGSAK LDDWVLCRIY KKNSSGLKPL MSGLHSSNEY 180 SHGSSASSSS QFDDMLESLP EMDDRFPNLP RLNSLKTEKL NLERLDSANF DWAILAGLKP 240 MPEAAGIQAQ AQAQVPTHVN HLIHNHNNMN FANDVYAHPT NFRGNAKVES ITFDEEVESG 300 IRNQRADKSG YFQQALGGFS QTYTNGMDQF GIQRPNQTLN LGFRQ
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-108 | 1 | 168 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-108 | 1 | 168 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-108 | 1 | 168 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-108 | 1 | 168 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-108 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-108 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-108 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-108 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-108 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-108 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-108 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-108 | 1 | 168 | 7 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-108 | 1 | 168 | 4 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-108 | 1 | 168 | 4 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in abscisic acid-mediated stomatal closure (PubMed:25005917). Regulates the expression of NCED1, a gene involved in the biosynthesis of abscisic acid (ABA) (PubMed:25005917). Required for the stomatal closure induced by the bacterial pathogen Pseudomonas syringae pv tomato DC3000, but not for stomatal reopening (PubMed:25005917). {ECO:0000269|PubMed:25005917}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), dehydration and wounding. {ECO:0000269|PubMed:25005917}. |