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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_03673.1_g00003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
G2-like |
| Protein Properties |
Length: 301aa MW: 33104.3 Da PI: 5.8392 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_03673.1_g00003.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 109.2 | 2.1e-34 | 49 | 103 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt+eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYR+
Sme2.5_03673.1_g00003.1 49 KPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRM 103
79****************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
| GO:0010628 | Biological Process | positive regulation of gene expression |
| GO:0016036 | Biological Process | cellular response to phosphate starvation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MYSTLPIRNL GIEESGDFFN HHINLQSSLS VDGTNLPGDS CLVLSADPKP RLRWTTELHE 60
RFVDAVTQLG GPDKATPKTI MRTMGVKGLT LYHLKSHLQK YRMGKQSAKE ATENSKDVSC 120
PAESQDTGSS TSGSSRVIAQ DIYEGLQVTE ALRVQMEVQR RLQEQLEVQR HLQLRIEAQE 180
KYLQSILEKA CKAFSSQSVE SNGLEVNREE LSELAFVSVP SLPDIDSSIE KKNACHVPAR 240
LGDCLLDDCL PSNGIGALKK RPRAFSTVNG LPMESNTREL GLVDGDEIDA MLHQGGGGYG 300
H
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 7e-20 | 49 | 105 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 7e-20 | 49 | 105 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 7e-20 | 49 | 105 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 7e-20 | 49 | 105 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}. |
| UniProt | Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
| UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975448 | 3e-74 | HG975448.1 Solanum pennellii chromosome ch09, complete genome. |
| GenBank | HG975521 | 3e-74 | HG975521.1 Solanum lycopersicum chromosome ch09, complete genome. |
