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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_03528.1_g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
G2-like |
Protein Properties |
Length: 296aa MW: 32598.7 Da PI: 6.6712 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_03528.1_g00005.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 108.9 | 2.7e-34 | 47 | 101 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl
Sme2.5_03528.1_g00005.1 47 RPRLRWTAELHERFVDAVTQLGGPDKATPKTIMKAMGVKGLTLYHLKSHLQKYRL 101
59****************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MYSALGMDKN GGVNEYHHHI HNLQSSFSGE MTNLPGDTCL VLTADHRPRL RWTAELHERF 60 VDAVTQLGGP DKATPKTIMK AMGVKGLTLY HLKSHLQKYR LGRQSKEAAE NFKDESCMAE 120 SQDTTSSVSG SSKVVPQDIN DCGYQVTEAF RVQIEVQRRL HEQLEVQRHV QLRIEAQGKY 180 LQTILEKACK VLNYTSVDSP DLDTAREQLS ELAIKGANNC DGIVTVSSLP EVTASFQNKN 240 ASDIPATIGD CLPSDTTIAS PTSIGVLKKR PRALANGDAS PVDNNMAQVQ WMMTNS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 2e-20 | 47 | 103 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-20 | 47 | 103 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 3e-20 | 47 | 103 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-20 | 47 | 103 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-20 | 47 | 103 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-20 | 47 | 103 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-20 | 47 | 103 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-20 | 47 | 103 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-20 | 47 | 103 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-20 | 47 | 103 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-20 | 47 | 103 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-20 | 47 | 103 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975451 | 1e-125 | HG975451.1 Solanum pennellii chromosome ch12, complete genome. |