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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_03324.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
YABBY |
Protein Properties |
Length: 135aa MW: 15252.7 Da PI: 9.0569 |
Description |
YABBY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_03324.1_g00002.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | YABBY | 142.1 | 6.2e-44 | 11 | 108 | 75 | 170 |
YABBY 75 lkveeenlksnvek.eesastsvssekl..senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaa 157
++++e++++ +++ + s+s+s+ s + + d++ pr pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aa
Sme2.5_03324.1_g00002.1 11 KRQNESSIEDGMSRgYGSSSSSTDSCHRfsPVPADHDQPRSPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAA 95
3444444444333312222222222221236788999999999.9***************************************** PP
YABBY 158 knWahfPkihfgl 170
knWahfP+ihfgl
Sme2.5_03324.1_g00002.1 96 KNWAHFPHIHFGL 108
***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 135 aa
Download sequence Send
to blast |
MQQYDDNSDS KRQNESSIED GMSRGYGSSS SSTDSCHRFS PVPADHDQPR SPPIRPPEKR 60 QRVPSAYNRF IKEEIQRIKA SNPDISHREA FSTAAKNWAH FPHIHFGLKL DGNKQTNKLD 120 HSVAGEGPQK SIGFY
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Functional Description ? help
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Source |
Description |
UniProt | Involved in the abaxial cell fate determination during embryogenesis and organogenesis. {ECO:0000250}. |