PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_03053.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family EIL
Protein Properties Length: 670aa    MW: 74296.7 Da    PI: 5.7858
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_03053.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN34111.4e-125363941345
                              XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                     EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpveg 86 
                              +el++rmwkd+++lkrlke++k    +++a   +k+ ++ ++qa rkkmsraQDgiLkYMlk mevcna+GfvYgiip kgkpv+g
  Sme2.5_03053.1_g00002.1  36 DELERRMWKDRVKLKRLKEKQKLA--ARQA--AEKQDKQVTDQATRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPGKGKPVSG 117
                              79****************999963..3554..566789************************************************ PP

                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH CS
                     EIN3  87 asdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPW 172
                              +sd++raWWkekv+fd+ng aai+ky+a++l+ +++ ++  ++ + +  l++lqD+tlgSLLs+lmqhc ppqr++plekgv+pPW
  Sme2.5_03053.1_g00002.1 118 SSDNIRAWWKEKVKFDKNGLAAIAKYEAECLARGDGAGS--QNGNRQGVLQDLQDATLGSLLSSLMQHCAPPQRKYPLEKGVPPPW 201
                              ********************************9999998..67999**************************************** PP

                              ---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S- CS
                     EIN3 173 WPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekeca 258
                              WPtG+e+ww ++gl+k q+ ppy+kphdlkk+wkv+vLtavikhmsp+i++ir+l r+sk+lqd+m+akes ++l vl++ee+ ++
  Sme2.5_03053.1_g00002.1 202 WPTGNEEWWVKMGLPKGQK-PPYRKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRLIRKSKSLQDRMTAKESSIWLDVLSREEATLQ 286
                              *******************.9***************************************************************** PP

                              -XXXX..XX......XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX...................XXXXXXXXXXXXXXX CS
                     EIN3 259 tvsah..ss......slrkqspkvtlsceqkedvegkkeskikhvqavktta...................gfpvvrkrkkkpses 317
                              +  ++  ss       +r +++k  +s+++++d +g ++   + ++ +++++                   + + +r+r +k+++s
  Sme2.5_03053.1_g00002.1 287 QAGSEngSSsievpaGSRGEKKKPSISSDSDYDIDGIDDGIGSVSSRDERRNqplnahslnaipqshqsteNGDGHRRR-RKRARS 371
                              9999966336888776677999*************55555545444444444566667677777765544322222222.233333 PP

                              XXXXXX......XXXXXXX.XXXXXXXX CS
                     EIN3 318 akvsskevsrtcqssqfrgsetelifad 345
                              + +      +++q s + g e++++++d
  Sme2.5_03053.1_g00002.1 372 NPT-----EKQTQPSLLHGDEQSNTLPD 394
                              333.....34456666666666666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048738.2E-12136282No hitNo description
Gene3DG3DSA:1.10.3180.106.7E-69158288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-60164285IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    Send to blast
MINADEFGNS SDIEIDDIKC DNIAEKDVSD EEIEPDELER RMWKDRVKLK RLKEKQKLAA  60
RQAAEKQDKQ VTDQATRKKM SRAQDGILKY MLKLMEVCNA RGFVYGIIPG KGKPVSGSSD  120
NIRAWWKEKV KFDKNGLAAI AKYEAECLAR GDGAGSQNGN RQGVLQDLQD ATLGSLLSSL  180
MQHCAPPQRK YPLEKGVPPP WWPTGNEEWW VKMGLPKGQK PPYRKPHDLK KMWKVGVLTA  240
VIKHMSPDIA KIRRLIRKSK SLQDRMTAKE SSIWLDVLSR EEATLQQAGS ENGSSSIEVP  300
AGSRGEKKKP SISSDSDYDI DGIDDGIGSV SSRDERRNQP LNAHSLNAIP QSHQSTENGD  360
GHRRRRKRAR SNPTEKQTQP SLLHGDEQSN TLPDIKGSEM LLGGCITSDS LQGDDKSEAT  420
KPVENYTESL SHLPLQDSNL SLVPSVNVAS TEETYIGAEP SLYPIAQNSA IVPYESEVRL  480
ENQDYIVQHQ FQDAQFHGLQ KISGMNDGPQ ISLSHYGPPN NGLQYGPHSS VVHADLQVSE  540
FAHGSQFANF SQPPIYHSYS SAEFGSTHVE PQSHLACSEL QIGPTDSGVG PVLHGSGTDI  600
SRDSDHHGKD MFQNNHDRHI EMPFESPLAI GSSYATLDSP IDLGLDVQSY LDNSDYDLDF  660
DKELMSFFAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A3e-721622939140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754400.0HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015164694.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-170EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLM1BXD00.0M1BXD0_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000551020.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-157ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]