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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_03006.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
B3 |
Protein Properties |
Length: 192aa MW: 22368.2 Da PI: 6.5128 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_03006.1_g00003.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 80.6 | 1.6e-25 | 41 | 138 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
f+k+ltpsdv++++ lv+p+k+a+e+ ++ +++ +++++d+s+ W++++ y+k+s+++++t+GW +Fvk gLk +D+vvF l +
Sme2.5_03006.1_g00003.1 41 FQKELTPSDVGNNR-LVIPRKYATEYFSQIQQKEEVSFYDTSNTLWKFRFFYCKSSQKCTFTRGWPKFVKHEGLKPKDVVVFNLCE 125
99*********985.***********666667789************************************************997 PP
S.SEE..EEEEE- CS
B3 87 r.sefelvvkvfr 98
+ ++ +v+ v++
Sme2.5_03006.1_g00003.1 126 SkNCNAFVIDVVK 138
7677777777765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 192 aa
Download sequence Send
to blast |
MEDKRNEEKD GISDSRFKGV VSEHSVHFVE DDGEFLYKKL FQKELTPSDV GNNRLVIPRK 60 YATEYFSQIQ QKEEVSFYDT SNTLWKFRFF YCKSSQKCTF TRGWPKFVKH EGLKPKDVVV 120 FNLCESKNCN AFVIDVVKKV EVLPMNHHQQ EEMRAQPIDN HGENEDDEDA LTPILLFGKQ 180 IGCSKTKKEN GS
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |