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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_02845.1_g00006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
G2-like |
Protein Properties |
Length: 223aa MW: 25707.8 Da PI: 9.4071 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_02845.1_g00006.1 | genome | EGD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 98.3 | 5.4e-31 | 55 | 108 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtpeLH +Fv+a+++LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
Sme2.5_02845.1_g00006.1 55 PRLRWTPELHLSFVSAIDRLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 108
8****************************************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MTSESIDLNE EVGDEEVIEV TSDESEKIRE ENNSTSCGNY SSTKKVRQYV RSKLPRLRWT 60 PELHLSFVSA IDRLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK LGEFGQVLGH 120 GHRTNQGRSY LYGKLSQRLF NPLQDFKMKN GAIVLARNFN DGDDNINNNF QNSFARSRHE 180 TKENFSSMNM DNSQREIVHQ TVRKGQLDPL PQRSQMRESW ESC
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 4e-19 | 56 | 110 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-19 | 56 | 110 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-19 | 56 | 110 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-19 | 56 | 110 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975515 | 4e-54 | HG975515.1 Solanum lycopersicum chromosome ch03, complete genome. |