 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_02785.1_g00003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
G2-like |
| Protein Properties |
Length: 405aa MW: 44995.3 Da PI: 7.8982 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_02785.1_g00003.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 104.9 | 4.8e-33 | 261 | 316 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
Sme2.5_02785.1_g00003.1 261 KQRRCWSPELHRRFVDALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 316
79****************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MGSIPAELSL DCRPSFIPKS ITDFLQQLSL IPNVPDKLSQ IDDYITRLED EMRKIDAFKR 60
ELPLSILLVK DAIVALREES TQYRKSRTEP VLEEFIPLKK SSHEDTKAEI TKDKDSREKM 120
SWMSSVQLWN SESHCQNTDE PTSKLPSKSE LKVDNQRSPE EGNSSVTEDP FQSCKIMNMG 180
KAFSVPFKGF SGFSVTAVRK DKDELPGLSL HTPGITKLRE DTVTSALNSK HNGSRGGLSR 240
VAGCQSNIRT GSLSQQQSAR KQRRCWSPEL HRRFVDALQQ LGGSQVATPK QIRELMQVDG 300
LTNDEVKSHL QKYRLHTRRI PNSQTQPANQ SGVSLGNLWM SQGQYGESSK QSSSQSGSPQ 360
GPLHLGGSCG GTSTTVGDSM EEDDDVKSEN HSWKNHVHAS GKIDV
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 6e-14 | 261 | 314 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 6e-14 | 261 | 314 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 5e-14 | 261 | 314 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-14 | 261 | 314 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-14 | 261 | 314 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-14 | 261 | 314 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 6e-14 | 261 | 314 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 6e-14 | 261 | 314 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 6e-14 | 261 | 314 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 6e-14 | 261 | 314 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 6e-14 | 261 | 314 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 6e-14 | 261 | 314 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975440 | 1e-145 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
