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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_02737.1_g00005.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
bHLH |
Protein Properties |
Length: 154aa MW: 18223.8 Da PI: 9.7523 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_02737.1_g00005.1 | genome | EGD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 35.3 | 2.1e-11 | 60 | 111 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+ h +Er RR+++ + +++L ++lP + +++K s + ++Av+YIk+L+
Sme2.5_02737.1_g00005.1 60 KILHRDVERHRRQNMANLYATLISHLPYeS---SKGKRSMRDHMQEAVNYIKHLE 111
66799***********************66...********************96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 154 aa
Download sequence Send
to blast |
MDCLSEIFSS KKIKDDDQQL IQIPSTPCQP YHQDLATNDL NYKRKRSTSA LIRKNSVQKK 60 ILHRDVERHR RQNMANLYAT LISHLPYESS KGKRSMRDHM QEAVNYIKHL ENNIKELEIK 120 RKELEDLALC SSKEDIRLRC GDFDQRKYFT LKSA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975443 | 6e-46 | HG975443.1 Solanum pennellii chromosome ch04, complete genome. |