 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_02703.1_g00004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
G2-like |
| Protein Properties |
Length: 363aa MW: 41234.9 Da PI: 5.6544 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_02703.1_g00004.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 96.8 | 1.5e-30 | 207 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rW+++LH+rF+e+v++LGG++kAtPk+il+lm++++Ltl+hvkSHLQkYR
Sme2.5_02703.1_g00004.1 207 KTRIRWSEDLHDRFLECVNHLGGADKATPKQILNLMDLESLTLDHVKSHLQKYRN 261
68****************************************************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MSIQRFISTQ NNEYFSTDYN FEFPKSSVQD LVDQQLQYSS SSSMISCIGS PSSAFFATER 60
CLGLTQYDVN EDSTSQLIKN YDLQMSSFDP QQCKNGTLED SLAQSEPDFR YKISLPSFIR 120
TEFSTSPFSD VSESEKESLL HLQNELLGEL DTSYRKHPSL PFDGYRDYSL SRDLCCSKLA 180
NMRQQSASPS VSCHNSASSG ASNKPSKTRI RWSEDLHDRF LECVNHLGGA DKATPKQILN 240
LMDLESLTLD HVKSHLQKYR NAKHPESAGK SEKRNSQDAV TDIDSRTGIE IKDALKMQLE 300
AQRCLHEQLE AQRMLQMRIE EQAKKLKMIF DQQQKTNRTL LKTRNSNISS PGVEILVVED 360
SND
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-18 | 207 | 264 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-18 | 207 | 264 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 1e-18 | 207 | 264 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-18 | 207 | 264 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-18 | 207 | 264 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-18 | 207 | 264 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-18 | 207 | 264 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-18 | 207 | 264 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-18 | 207 | 264 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-18 | 207 | 264 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-18 | 207 | 264 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-18 | 207 | 264 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975449 | 1e-121 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |
