 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_02640.1_g00006.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
G2-like |
| Protein Properties |
Length: 177aa MW: 20357.9 Da PI: 7.698 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_02640.1_g00006.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 83.9 | 1.7e-26 | 11 | 64 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54
k+rl+Wt++LH+ F +av+qLGG+e+AtPk il++m+++gLt+ hvkSHLQ R
Sme2.5_02640.1_g00006.1 11 KERLKWTKDLHDLFEKAVSQLGGPERATPKGILKVMGIPGLTIFHVKSHLQVQR 64
68*************************************************877 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MDSNRSDSSS KERLKWTKDL HDLFEKAVSQ LGGPERATPK GILKVMGIPG LTIFHVKSHL 60
QVQRNLKMKL EAQGRFLDRI MEEQKAHASG SRPSCKSYSY SPLSLPSLCE ESESNIKELE 120
VDKLDRKRTR FEEDDAFLNH RYNNNNNVTY SPEELAWSTL ATYQSSPHLH ALYDYLI
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 3e-19 | 10 | 69 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 3e-19 | 10 | 69 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 3e-19 | 10 | 69 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 3e-19 | 10 | 69 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 3e-19 | 10 | 69 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 3e-19 | 10 | 69 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 3e-19 | 10 | 69 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 3e-19 | 10 | 69 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975521 | 4e-50 | HG975521.1 Solanum lycopersicum chromosome ch09, complete genome. |
