 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_02584.1_g00003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
Dof |
| Protein Properties |
Length: 360aa MW: 39038.7 Da PI: 7.4758 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_02584.1_g00003.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 126 | 1.2e-39 | 25 | 85 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
ke+al+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk +
Sme2.5_02584.1_g00003.1 25 KEQALNCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIK 85
67999*****************************************************975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010052 | Biological Process | guard cell differentiation |
| GO:0010118 | Biological Process | stomatal movement |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MMSQDNKDES QSSGGGGGST TVRPKEQALN CPRCDSPNTK FCYYNNYSLS QPRHFCKTCR 60
RYWTKGGALR NVPIGGGCRK NKKIKTSSSS SRFSGDSKDT IGGSSDIGGL KFLHGLSPAM 120
DFQLGGLSFP RLSNSSTSVG GSIFNQYSSF GENSAANIGS TSCFSLDPSG SCSGSLLGFN 180
NNFSFSSSML KQGTDGIQEM GSMGVHHGTM ASSIESLSSI NQDLHWKLQQ QRLAMLFGGE 240
NQKENIVSSS IPLHDDQNQI QIQKPQPILF QNLEISSSKQ QEHHQEAFGS NNINSRKDCS 300
TTTTTHGNNL ATEWFFDNSF GVNPSSTNSD NGNANEDQNG NNWNTTIQAW SNLNQYSTLP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975523 | 1e-126 | HG975523.1 Solanum lycopersicum chromosome ch11, complete genome. |
