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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_02226.1_g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
WRKY |
Protein Properties |
Length: 110aa MW: 12626.2 Da PI: 9.6586 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_02226.1_g00005.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 36.4 | 1.1e-11 | 81 | 103 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS
WRKY 1 ldDgynWrKYGqKevkgsefprs 23
ldDgy+WrKYGqK vk+++fp s
Sme2.5_02226.1_g00005.1 81 LDDGYRWRKYGQKAVKNNKFPSS 103
59*******************76 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB061245 | 3e-53 | AB061245.1 Solanum tuberosum StWRKY mRNA for WRKY-type DNA binding protein, complete cds. |
GenBank | AJ278507 | 3e-53 | AJ278507.1 Solanum tuberosum mRNA for WRKY DNA binding protein (WRKY1 gene). |