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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_02214.1_g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
GRAS |
Protein Properties |
Length: 545aa MW: 62405 Da PI: 6.446 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_02214.1_g00008.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 339.7 | 4.9e-104 | 176 | 541 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88
+lL++cA+a+++ d + a++ L+ ++ ++sp+g++++R+ +yf+ AL+arla+++ ely a + ++ s ++ l+a f+++
Sme2.5_02214.1_g00008.1 176 SLLTQCAQALANYDIRIAHEKLKLIRLHCSPYGEATERMSHYFADALEARLAGTGVELYTASARRTMS---AADILKA---FQHAH 255
79***************************************************999999665555555...6666666...44443 PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeel 172
++ aN+ I + + +++ +Hii f+i++G+QWp+L+q ++ Rp+gpp+lRiTg++ p++g +e++eetg+rLak+++++
Sme2.5_02214.1_g00008.1 256 -SGGCLNIFANKSIGKLTREATSIHIINFGIMYGFQWPCLIQGISLRPSGPPKLRITGIDFPQPGfrPAERVEETGRRLAKYCKRF 340
.34457889*******************************************************9********************* PP
GRAS 173 gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfl 258
+vpfe+n+ +ak++++++le+L+++++E+l+Vn+ ++l ++lde+v +s+rd+vL+l+k+++P+v+ + + ++ns+ F++rf
Sme2.5_02214.1_g00008.1 341 NVPFEYNA-IAKKWDSIQLEDLKINSDEKLVVNCLYRLINVLDETVYENSPRDDVLRLIKQMKPDVFLHGIVNGSYNSTFFVTRFK 425
********.7**************************************************************************** PP
GRAS 259 ealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
eal ++s+lfd++ea++p e++ r+ E++++g+ei+n+vaceg++r+er e +++W+ r ++aGF+++pl ++++k++++ +++
Sme2.5_02214.1_g00008.1 426 EALFHFSSLFDMMEATVPCENQSRVLFEKVIFGKEIMNIVACEGTARVERPEPYKQWQLRNQRAGFRQLPLHQEMVKEVRAKVQQQ 511
************************************************************************************** PP
GRAS 345 ksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ + + v+e+ ++++gWk+r ++++S+Wr
Sme2.5_02214.1_g00008.1 512 YHKDFLVDEDGYWMLQGWKGRVIYALSCWR 541
*888*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 545 aa
Download sequence Send
to blast |
MESNNHSSLA CDYFDGVLDY INQMLMEEEE DLENRPCMLQ DSLALQATEK SFYDALSEDQ 60 QLIQHTCVNY CTEKGQKYPQ GYEDFSHSVE GETNNKRLAS CSEGLDQTQL YDKTLLCSSK 120 NPGFYSDPCC CQSTNDGSIE EQLAYKPLYF QPRMPKRGRP RAGAEQVVAN ALDLGSLLTQ 180 CAQALANYDI RIAHEKLKLI RLHCSPYGEA TERMSHYFAD ALEARLAGTG VELYTASARR 240 TMSAADILKA FQHAHSGGCL NIFANKSIGK LTREATSIHI INFGIMYGFQ WPCLIQGISL 300 RPSGPPKLRI TGIDFPQPGF RPAERVEETG RRLAKYCKRF NVPFEYNAIA KKWDSIQLED 360 LKINSDEKLV VNCLYRLINV LDETVYENSP RDDVLRLIKQ MKPDVFLHGI VNGSYNSTFF 420 VTRFKEALFH FSSLFDMMEA TVPCENQSRV LFEKVIFGKE IMNIVACEGT ARVERPEPYK 480 QWQLRNQRAG FRQLPLHQEM VKEVRAKVQQ QYHKDFLVDE DGYWMLQGWK GRVIYALSCW 540 RPVDN
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |