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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_01874.1_g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
M-type_MADS |
Protein Properties |
Length: 216aa MW: 23832.6 Da PI: 5.202 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_01874.1_g00008.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 72.8 | 2.9e-23 | 14 | 61 | 2 | 49 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
ri+n+snrqvtfskRr+g++KKA+E++++Cda a+++f+s++k y y
Sme2.5_01874.1_g00008.1 14 RISNDSNRQVTFSKRRTGLFKKASEICTMCDATCAIVVFASNDKPYSY 61
8******************************************99988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MRRPGGRRRL PMDRISNDSN RQVTFSKRRT GLFKKASEIC TMCDATCAIV VFASNDKPYS 60 YVHPSVELSI DRYLGVDPPV DANAAHPSVV AHRNASADRL NNKLNKLVKL HEDEKKYGKE 120 LKAMRKEPPN DELDLLSLTK LCEALEAADK EVERVVNHNK ELGIKYPYQT LGSAFAPLRA 180 EENILPDSDS DGDGLSDSDG NGDGDEGSSD SDEVVS
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