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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_01757.1_g00011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
G2-like |
Protein Properties |
Length: 217aa MW: 23864.5 Da PI: 6.3649 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_01757.1_g00011.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 78.2 | 1e-24 | 92 | 143 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53
k +++WtpeLH++Fv+ave+L G +kA+P++ilelm+ +gLt+++++SHLQ++
Sme2.5_01757.1_g00011.1 92 KVKVDWTPELHKKFVKAVEKL-GVDKAVPSRILELMDTPGLTRHNIASHLQRF 143
5689*****************.*****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MLGVSPPLSY TNENENYDLF QDFPDGNLIG TVNFDDLFEG INGGDLLPDL EIFAEFSVSN 60 CNESANNVNM KSKSKEAKKS SGQIKNPQGK RKVKVDWTPE LHKKFVKAVE KLGVDKAVPS 120 RILELMDTPG LTRHNIASHL QRFAAPLMVP GIPLPPAIIK VDKISSDLHP SKESIDAAIE 180 DVLAKPQMPL PIGLKPPSID SVLKELQRHE ITKIPPT
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that functions with GLK1 to promote chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport. Acts in a cell-autonomous manner to coordinate and maintain the photosynthetic apparatus within individual cells. May function in photosynthetic capacity optimization by integrating responses to variable environmental and endogenous cues (PubMed:11828027, PubMed:12220263, PubMed:18643989, PubMed:19376934, PubMed:19383092, PubMed:19726569). Prevents premature senescence (PubMed:23459204). {ECO:0000269|PubMed:11828027, ECO:0000269|PubMed:12220263, ECO:0000269|PubMed:18643989, ECO:0000269|PubMed:19376934, ECO:0000269|PubMed:19383092, ECO:0000269|PubMed:19726569, ECO:0000269|PubMed:23459204}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. Repressed by BZR2. {ECO:0000269|PubMed:12220263, ECO:0000269|PubMed:21214652}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF807948 | 1e-126 | JF807948.1 Solanum phureja golden 2-like 2 transcription factor (GLK2) mRNA, complete cds. |
Publications
? help Back to Top |
- Leister D,Kleine T
Definition of a core module for the nuclear retrograde response to altered organellar gene expression identifies GLK overexpressors as gun mutants. Physiol Plant, 2016. 157(3): p. 297-309 [PMID:26876646] - Nagatoshi Y, et al.
GOLDEN 2-LIKE transcription factors for chloroplast development affect ozone tolerance through the regulation of stomatal movement. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(15): p. 4218-23 [PMID:27035938] - Han XY, et al.
GOLDEN2-LIKE transcription factors coordinate the tolerance to Cucumber mosaic virus in Arabidopsis. Biochem. Biophys. Res. Commun., 2016. 477(4): p. 626-632 [PMID:27346129] - Ni F, et al.
Turnip Yellow Mosaic Virus P69 Interacts with and Suppresses GLK Transcription Factors to Cause Pale-Green Symptoms in Arabidopsis. Mol Plant, 2017. 10(5): p. 764-766 [PMID:27964999] - Bastakis E,Hedtke B,Klermund C,Grimm B,Schwechheimer C
LLM-Domain B-GATA Transcription Factors Play Multifaceted Roles in Controlling Greening in Arabidopsis. Plant Cell, 2018. 30(3): p. 582-599 [PMID:29453227] - Zubo YO, et al.
Coordination of Chloroplast Development through the Action of the GNC and GLK Transcription Factor Families. Plant Physiol., 2018. 178(1): p. 130-147 [PMID:30002259]
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