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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_01699.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
Trihelix |
Protein Properties |
Length: 330aa MW: 37322.6 Da PI: 9.6996 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_01699.1_g00003.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 58.8 | 1.4e-18 | 38 | 130 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekk....rtsessstc 79
+W+++e+ aLi+a+r+++ +lrrg+l++++W+ev++ + ++++qC++k+e+l+kry+++ +++ r+ + s +
Sme2.5_01699.1_g00003.1 38 CWSHEETIALIDAYRDKWYSLRRGNLRANHWQEVADDVgskCPVDPPKTAVQCRHKMEKLRKRYRAEIQRAAPyggvRSHRYCSAW 123
8*************************************6333344489*****************998887641111244455667 PP
trihelix 80 pyfdqle 86
++f++++
Sme2.5_01699.1_g00003.1 124 VHFKRMD 130
7777775 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MATLSPSTQD FSNVTPAQIL PSANVTVAVA SRRLPPPCWS HEETIALIDA YRDKWYSLRR 60 GNLRANHWQE VADDVGSKCP VDPPKTAVQC RHKMEKLRKR YRAEIQRAAP YGGVRSHRYC 120 SAWVHFKRMD MMERGPDAVS PPPSDDEADE DVGDYHQNSV KLGEDLYGNN GNTSNRSSFQ 180 GVVSNGGGGF RIRIPGMPGL APPMAKPYRR YEDSGFEIPD NFGSSKMFRD GFVKKADLGK 240 RVVGEGVGEK KKGDPMAEMV AAIKVLGDGF VRMERMKMET ARELERMRMD MEMKRTEMMF 300 ESQRRIVEAF AQALWEKKHK KAKRMPTPDC
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