 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_01601.1_g00006.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
G2-like |
| Protein Properties |
Length: 297aa MW: 34275.4 Da PI: 7.0586 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_01601.1_g00006.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 83.9 | 1.7e-26 | 19 | 83 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGse...........kAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH++Fv+a+e+LGG++ +AtPk +l++m+v gLt++hvkSHLQ+YR+
Sme2.5_01601.1_g00006.1 19 PRLRWTPDLHHCFVHAIEKLGGQDilnpffgnicvEATPKLVLQMMDVRGLTISHVKSHLQMYRS 83
8*********************98666666666667****************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MGNCGRNGGV RQYIRSKVPR LRWTPDLHHC FVHAIEKLGG QDILNPFFGN ICVEATPKLV 60
LQMMDVRGLT ISHVKSHLQM YRSMKSDVNK QERMGIQPRK QQSLEDLDCH YQQQEQEEGC 120
VVEQQKLLVY QYPSFSSNHN MEISDCTPYF NSVQPTKRAR IERCSSQRKL EAVTNQYNSR 180
NDYIHSIMAE KNEIQESQFL KVLKTQDSSN RFKFEGLRKT ENVREEEEED EDEHGLSLSL 240
SLHHHPSTQR SNASSIISEI SETISSSSGG SNLNHHQYHW LSLSEKQNVN LNLSIAL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 4e-14 | 20 | 85 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 4e-14 | 20 | 85 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 4e-14 | 20 | 85 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 4e-14 | 20 | 85 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 4e-14 | 20 | 85 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 4e-14 | 20 | 85 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 4e-14 | 20 | 85 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 4e-14 | 20 | 85 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975443 | 3e-61 | HG975443.1 Solanum pennellii chromosome ch04, complete genome. |
| GenBank | HG975516 | 3e-61 | HG975516.1 Solanum lycopersicum chromosome ch04, complete genome. |
