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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_01585.1_g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
G2-like |
Protein Properties |
Length: 352aa MW: 39689.5 Da PI: 9.8721 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_01585.1_g00005.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 100.3 | 1.3e-31 | 165 | 218 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt+ LH+rF++av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
Sme2.5_01585.1_g00005.1 165 PRMRWTSSLHARFIHAVDLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 218
9****************************************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MDLLFWRRAL ESRNSKPDKN NNSLFELSLS NPNHKPSAPP PPPPQLINSS HFHPLQNTNF 60 IQQQQLSFLR PIRGIPVYHQ NPLPVSHHHN YPIFPPHQTF DNTSTTSTTP TLPIHSSGCC 120 ISSFNNNTNK TIPNSSPTTV PFHQAGLMRS RFLSRFPAKR TMRAPRMRWT SSLHARFIHA 180 VDLLGGHERA TPKSVLELMD VKDLTLAHVK SHLQMYRTVK TTDRAAVPAS SGQSEVFDNG 240 SSGETSEDLM PDMENSRKSG LSDQKGRNSM HLQEIDYHVL WSNSSRESWQ LHGKHGDYTG 300 NIPSLEKIEK NQQKDMEAKC LSYDRTSGEV SSSSITETSP KKPNLEFTLG RP
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 7e-17 | 166 | 220 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-17 | 166 | 220 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-17 | 166 | 220 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-17 | 166 | 220 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-17 | 166 | 220 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-17 | 166 | 220 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-17 | 166 | 220 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-17 | 166 | 220 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975445 | 1e-67 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |