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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_01553.1_g00006.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
SRS |
| Protein Properties |
Length: 341aa MW: 36598.3 Da PI: 7.0695 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_01553.1_g00006.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 222.5 | 8.5e-69 | 113 | 268 | 3 | 155 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrelkskk 82
g++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thv+stWvpaakrrerqqql+++++++++++ +++++kr+r + +
Sme2.5_01553.1_g00006.1 113 GGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCHTHVRSTWVPAAKRRERQQQLSTLQQQQEEEQqqqqqqHRDNPKRQR--EDPS 196
5789**************************************************99988877666333222222222222..3355 PP
DUF702 83 qsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155
+s+l +t++ + s++ le+ ++P++v s+avf+cvr+ssvdd+e+++aYqt+v+igGhvfkGiLydqG+e++
Sme2.5_01553.1_g00006.1 197 ASSLVCTRILPS-STSGLEVGNFPAKVTSNAVFHCVRMSSVDDAEDQFAYQTVVNIGGHVFKGILYDQGPENQ 268
667777777665.456899999************************************************985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MAGFFSLGGG AGSSSQDQQE TTNNPPTQIA PESNWFLYRN DHQELPTSYR GFELWQTSNS 60
QPQIRNPLQD LYPTAAVGLG IGPSHSGFTT VARPDHDPPS VGGSGLVMMR SAGGGISCQD 120
CGNQAKKDCQ HMRCRTCCKS RGFQCHTHVR STWVPAAKRR ERQQQLSTLQ QQQEEEQQQQ 180
QQQHRDNPKR QREDPSASSL VCTRILPSST SGLEVGNFPA KVTSNAVFHC VRMSSVDDAE 240
DQFAYQTVVN IGGHVFKGIL YDQGPENQYM AAGESSSGGG SASHQHNLIG AAGTATSAAT 300
SGRGGGAAAA PETSPYLDPS LYPAPLNALM AGTQFFPPPR S
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KC331912 | 0.0 | KC331912.1 Solanum lycopersicum expression of terpenoids 3 mRNA, partial cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G51060.1 | 2e-73 | Lateral root primordium (LRP) protein-related |
