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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_01395.1_g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
M-type_MADS |
Protein Properties |
Length: 129aa MW: 14916.1 Da PI: 9.221 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_01395.1_g00007.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 41.6 | 1.5e-13 | 7 | 54 | 3 | 50 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
++n + + ++ R++ i K EL +LCd++v+ +i +++g+l++++
Sme2.5_01395.1_g00007.1 7 SNNRRINPKSYQVRKECIKRKSMELATLCDIKVCTVITGPHGELQTWP 54
566677778999***********************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 129 aa
Download sequence Send
to blast |
MAEQDQSNNR RINPKSYQVR KECIKRKSME LATLCDIKVC TVITGPHGEL QTWPENLAAV 60 KKVLDLYTQN LKPEKKDEGT SKLEPQEEQG EKDILTLVEE KLEAVNKRIR FLENNQNVAD 120 RKGKKPRIQ
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