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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_01077.1_g00011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
WRKY |
Protein Properties |
Length: 141aa MW: 15026.7 Da PI: 5.6665 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_01077.1_g00011.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 24.8 | 4.5e-08 | 113 | 134 | 26 | 47 |
EE-STT---EEEEEE-SSSTTE CS
WRKY 26 rCtsagCpvkkkversaedpkv 47
+Ct+++Cpvkkkvers++ p+v
Sme2.5_01077.1_g00011.1 113 KCTHPNCPVKKKVERSQDTPSV 134
9****************87776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 141 aa
Download sequence Send
to blast |
MGGFDDHVAI MGDWMAPSPS PRTFFSSLLG DDVGSRSTLE GTNETKRENI ASGPQEHVGN 60 SDGNDGAQAA ITEQQPVKLD ALSDPKMSSR GGGLLERMAA RAGFNAPKLN TEKCTHPNCP 120 VKKKVERSQD TPSVYPLTPN T
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC240359 | 1e-126 | AC240359.1 Solanum tuberosum chromosome 7 clone RHPOTKEY169K08, complete sequence. |