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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_01060.1_g00010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
WRKY |
Protein Properties |
Length: 402aa MW: 45040.3 Da PI: 9.7619 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_01060.1_g00010.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 99.9 | 1.6e-31 | 280 | 338 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ ed +++++tYegeHnh+
Sme2.5_01060.1_g00010.1 280 SDEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDASMLIVTYEGEHNHP 338
69************************9988****************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MEEIEEGNKA AVEHCHRVID LLSSRKHDQN SYTNIVRETG EAVNKFKKVV TLLNSTLGHA 60 RVRKSNEFKT PLPRDILVEN LNSKNDDQAK ALKGLLPFNS PENRVLEVGT NVKCNLSLGS 120 PSLELSSNSR NPLNLGQQTP LPSYNYLQQQ QQQRRFLPHP QQPQMKQPAE MLYRQSNSGI 180 SLNFDSSTCA PTMSSTRSFI SSLSVDGSVA NGSNFHLIGA SNSADKSLFQ NKRKCSERGD 240 EGSMKCGSSG KCHCSKKRKH KVKRSIKIPA ISNKLADIPS DEYSWRKYGQ KPIKGSPHPR 300 GYYKCSSMRG CPARKHVERC LEDASMLIVT YEGEHNHPRV PSQLDKTSIL GDEELCHRIR 360 DFPDCCRFRF VTMLRKFIFL SSCPPSLLLG GMGLNPIPYS TS
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |