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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_01013.1_g00006.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
BES1 |
| Protein Properties |
Length: 322aa MW: 34640.7 Da PI: 8.3625 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_01013.1_g00006.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 208 | 2.6e-64 | 2 | 145 | 1 | 148 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssa 86
++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGtty+kg+kpl + +++g sa
Sme2.5_01013.1_g00006.1 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEEDGTTYKKGCKPLGHVDIIGYSA 87
5899********************************************************************************** PP
DUF822 87 saspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
s+sp+ss++ +sp +sy++sp+sssfpsp+s++ + +a++ ++l+p+l++ls+ ss
Sme2.5_01013.1_g00006.1 88 SVSPCSSYK--------PSPGASYNPSPASSSFPSPVSSNYVANAQNnhdpNTLIPWLKNLSSGSS 145
*******99........9********************9999887777899*********998443 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG 60
WIVEEDGTTY KKGCKPLGHV DIIGYSASVS PCSSYKPSPG ASYNPSPASS SFPSPVSSNY 120
VANAQNNHDP NTLIPWLKNL SSGSSPSSSR FPHHLYIPGS SISAPVTPPL SSPTARTPRM 180
SDDPMATTWA QQHYAFLPSS TPASPGRQTP PDSGWLSGVQ TPQDGPSSPT FSLVSPNPFG 240
FKEPISNGGS RMWTPGQSGA CSPAIASGID QTADVPMSDA ISAEFAFGSH MMGLVKPWEG 300
ERIHEECATD ELELTLGNSS TR
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 4e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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