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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sme2.5_00942.1_g00010.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
G2-like |
| Protein Properties |
Length: 408aa MW: 45392.8 Da PI: 6.7197 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00942.1_g00010.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106.5 | 1.5e-33 | 44 | 98 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprl+Wtp+LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl
Sme2.5_00942.1_g00010.1 44 KPRLKWTPDLHERFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 98
79****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 408 aa
Download sequence Send
to blast |
MYHHHHQASD MHTSTRMTFP ERHLFLQGGN ASGDSGLVLS TDAKPRLKWT PDLHERFIEA 60
VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK NHHGQANSSG ASKAASMEKI 120
CESTGSPTSN PSIGPQPSNN IPISEAIQMQ IEVQRRLHEQ LELRIEAQGK YLQAVLEKAQ 180
ETLGTQNLGT IGLEAAKVQL SDLVSKVSNQ CLNSAFSEIQ ELSGFHTPQT PATQRLGDCS 240
IDSCLTSSEG PLRDLQEIHN NQIVLRTLNF GPCAEDIENQ TRLQQTALRW RDDLKENRLF 300
PKMDEHTEKE FAKETNWSNL SMNIGIQGGK RNVDSSYVDG RLNGIDADIK LFHQAATDRS 360
GSTKPEKQVS PQEYKLPYFA PKLDLNTDDQ TDAASNCKQL DLNGFSWN
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 2e-22 | 44 | 100 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-22 | 44 | 100 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-22 | 44 | 100 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-22 | 44 | 100 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}. |
