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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_00901.1_g00009.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
LBD |
| Protein Properties |
Length: 172aa MW: 19306.7 Da PI: 6.7608 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00901.1_g00009.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 130.1 | 9.3e-41 | 16 | 115 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+CaaCk+lrr+C ++C l pyfp ++p kf ++hk+FGasn++kll++lp ++r da+sslvyeA+ar+rdP+yG++gvi++l++q
Sme2.5_00901.1_g00009.1 16 PCAACKFLRRRCFDNCLLKPYFPPSEPLKFVVAHKIFGASNIIKLLQELPATQRADAVSSLVYEANARMRDPIYGSAGVITNLHEQ 101
7************************************************************************************* PP
DUF260 87 leqlkaelallkee 100
+ +l+a++al+++e
Sme2.5_00901.1_g00009.1 102 MTKLQAQIALARAE 115
*********99987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MADFSSSTEN RSLTTPCAAC KFLRRRCFDN CLLKPYFPPS EPLKFVVAHK IFGASNIIKL 60
LQELPATQRA DAVSSLVYEA NARMRDPIYG SAGVITNLHE QMTKLQAQIA LARAEISNLQ 120
SQNANLMTLI NKQYSSSSSP DYHYPFQDST LLSYDDNNSS YLGDTTWDSF WS
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