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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_00694.1_g00015.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
LBD |
Protein Properties |
Length: 159aa MW: 18279.7 Da PI: 7.7611 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_00694.1_g00015.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 133 | 1.2e-41 | 8 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqq 85
+CaaCk++rrkC+++Cvlapyfpa+qpkkf+n+h+lFG++n++k+l++l++e+ + dam+s++ye+++r + PvyG+v+ i+ l+q
Sme2.5_00694.1_g00015.1 8 SCAACKYQRRKCTPQCVLAPYFPANQPKKFQNAHRLFGVRNIVKTLEKLEDEDqKADAMKSIIYESDMREKFPVYGCVECIFYLNQ 93
6************************************************776659******************************* PP
DUF260 86 qleqlkaelallkee 100
ql+ +k+el+++ ++
Sme2.5_00694.1_g00015.1 94 QLDDTKQELEYVYAQ 108
*********998766 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MTGMSRVSCA ACKYQRRKCT PQCVLAPYFP ANQPKKFQNA HRLFGVRNIV KTLEKLEDED 60 QKADAMKSII YESDMREKFP VYGCVECIFY LNQQLDDTKQ ELEYVYAQLD MYRQQRSTES 120 YVGNGMLRVP LFSNTEGESS NQGATYPISH LSASSNQNQ
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