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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_00648.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
NAC |
| Protein Properties |
Length: 252aa MW: 28862.4 Da PI: 5.9667 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00648.1_g00002.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 69.3 | 1e-21 | 5 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy..kvePwdLpk........kvkaeek...ew.yfFskrdkkyatgk 72
+ GfrFhPtd e + +L + ++g+ ++ + + ++vd y +++Pwd+ + +e+ ++ yf +k kk ++++
Sme2.5_00648.1_g00002.1 5 QEGFRFHPTDAEAI-TFLLRFIAGEVMNDSGFiTTHVDTYnnQLDPWDIYSrgvpcgndD---GEDdcsQYrYFITKL-KK-KSES 84
68************.899999999998887873456697722579****73466654321...222232332444444.43.4568 PP
NAM 73 rknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
r nr + ++g Wk+ +k+v +++g+++g kk++ + + ++ + ++ +W+m+ey+l
Sme2.5_00648.1_g00002.1 85 RYNRnVGNKGCWKQNI-SKPVQKNGGQVIGYKKSMSYVN-KSYDRQNGHWLMKEYEL 139
99996788*****775.5999999*************95.555559*********97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MENLQEGFRF HPTDAEAITF LLRFIAGEVM NDSGFITTHV DTYNNQLDPW DIYSRGVPCG 60
NDDGEDDCSQ YRYFITKLKK KSESRYNRNV GNKGCWKQNI SKPVQKNGGQ VIGYKKSMSY 120
VNKSYDRQNG HWLMKEYELS SKILDKFNND RRDYVFCAIK MRTPTKDSKK LVDNASKVCM 180
NILEHQSPMA AESMNLEHQT LVAAKSTNLE HQSSAVVLEA LQGGSVLELE LLDFDYQYVP 240
ADFECLQSIT DS
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