 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_00581.1_g00007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
AP2 |
| Protein Properties |
Length: 455aa MW: 50090.5 Da PI: 6.5722 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00581.1_g00007.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 54.4 | 3.2e-17 | 142 | 191 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
Sme2.5_00581.1_g00007.1 142 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 191
78*******************......55************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 455 aa
Download sequence Send
to blast |
MFDLNLGIEE DAMETVTTSE KVKELSFGQI ENSGTSNSSI VNVETSSTAG DDEFISCSDH 60
RTDGYAFDIL RADFEVNEFV TKELFPLTGG ESAPPLSQQQ QQWLDLSGNY GGFPMEQRII 120
VAPPQQRQPV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR 180
AYDRAAIKFR GLDADINFNV SDYHDELKQM ASFSKEEFVH ILRRQSTGFS RGSSKYRGVT 240
LHKCGRWEAR MGQFLGKKAY DKAAIKCNGR EAVTNFDLST YEDELSIEAD NGGADHNLDL 300
NLGIAPSVLA NDQLGNTCQM GDYVVQCASN GLPGYRGAVQ SPSTAMGSKL PHGHQLLTDR 360
PLLWNGVNTS IFPTLKGTAL GKIIEVDSSP NWTQQDQHPY SGSPSVPLFS TAASSGFANS 420
TTAAAHLPRF STGPLPYQHS PSLANTNFGH YYCRS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FM246879 | 0.0 | FM246879.2 Solanum tuberosum subsp. andigena mRNA for relative to APETALA2 1 (rap1 gene). |
