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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_00557.1_g00010.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
NF-YC |
Protein Properties |
Length: 261aa MW: 29409.6 Da PI: 6.1392 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_00557.1_g00010.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 140 | 6.1e-44 | 140 | 233 | 7 | 100 |
NF-YC 7 ekqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92
++++e++tdfkn+elP++rikki+k+d+dv+m+s+e+P+ll+kacelfi +lt rswlhae+n+rrtlkk+d+++a+ +tdifdfl
Sme2.5_00557.1_g00010.1 140 QQEMEQVTDFKNNELPITRIKKIIKSDKDVRMVSTESPILLAKACELFIQDLTRRSWLHAEKNQRRTLKKTDVTTAIMETDIFDFL 225
456*********************************************************************************** PP
NF-YC 93 vdivprde 100
+divp d+
Sme2.5_00557.1_g00010.1 226 LDIVPGDD 233
*****987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MMLLLLMAPC QLSVVPFYAA GGSNGQDNLD CQRTKLRFKC VSGILVIVWG NSGDIDDDVT 60 HRIGAAWTKW RLACGVLCDK KIANQKCTCP EDACCRDEDV KMDVWSHQER QGQSAENPTR 120 AQHLLEKKEE QWKMLLASQQ QEMEQVTDFK NNELPITRIK KIIKSDKDVR MVSTESPILL 180 AKACELFIQD LTRRSWLHAE KNQRRTLKKT DVTTAIMETD IFDFLLDIVP GDDATGGSTP 240 SFLPFYAAGG SSGPDNLDRQ R
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