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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_00457.1_g00011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
C2H2 |
Protein Properties |
Length: 188aa MW: 21945.6 Da PI: 6.3372 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_00457.1_g00011.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.5 | 0.0001 | 36 | 58 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C++ F++ L H++ H
Sme2.5_00457.1_g00011.1 36 YECNFCKRGFTNAQALGGHMNIH 58
99*******************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MASEKNNNYS DCSSEDTIDR ESEKFNDDNT GIGRSYECNF CKRGFTNAQA LGGHMNIHRK 60 DKLKAKQNNF HHQESSKLTK EANHVFDNSR YYAPISSHHD ELQHHYSRAQ MSTYQFHFQL 120 PQNPSYQHVS NHHHDDSRLR HDNYFDPNNL NLRIGPTLIN DDDEEGGGKK NVDESELDLE 180 LRLGYNNY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975448 | 1e-114 | HG975448.1 Solanum pennellii chromosome ch09, complete genome. |