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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sme2.5_00378.1_g00015.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
G2-like |
| Protein Properties |
Length: 416aa MW: 47178.8 Da PI: 7.7439 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00378.1_g00015.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106.4 | 1.5e-33 | 44 | 98 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprl+Wtp+LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl
Sme2.5_00378.1_g00015.1 44 KPRLKWTPDLHERFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 98
79****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MYHHHHQDKS MHTSTRMSIP ERHLFLQGGN GNGDSGLVLS TDAKPRLKWT PDLHERFIEA 60
VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK NLHGQANASG ANKAVAATGV 120
ERISENSATC MSNPSMVTQP NKNIQISEAI QMQIEVQRRL HQQLEVQRHL QLRIEAQGKY 180
LQSVLEKAQE TLGRQNMETV GLEAVKVQLS EFVSKASNQC LKSAFPDIKE LSGFHRQQTQ 240
ATQPADRSID SCLTSREGSL RDNTLHDNQI GLRPFDFTPS IECKDIENDT RLQQTDLRWC 300
DNLKENRRLF YPMNEGSEKT FTQETNYSNL SMSIGLQDEK LNGSMIHSDG NFNGTDRNVK 360
LFHQVANRSE SVPERQKSTQ DYKLSYFEPK LDLNMHDEPD AASSRKQFDL NGFSWS
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 5e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 5e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 5e-22 | 44 | 100 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-22 | 44 | 100 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-22 | 44 | 100 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-22 | 44 | 100 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 5e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 5e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 5e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 5e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 5e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 5e-22 | 43 | 100 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that may act on the GAL1 promoter (PubMed:12008900). Acts redundantly with MYR2 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:12008900}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC244920 | 0.0 | AC244920.2 Solanum lycopersicum strain Heinz 1706 chromosome 10 clone sle-6e17 map 10, complete sequence. |
| GenBank | HG975522 | 0.0 | HG975522.1 Solanum lycopersicum chromosome ch10, complete genome. |
