 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_00252.1_g00017.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
G2-like |
| Protein Properties |
Length: 348aa MW: 40026.4 Da PI: 7.8532 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00252.1_g00017.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 103.1 | 1.7e-32 | 75 | 128 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtpeLH rFv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+
Sme2.5_00252.1_g00017.1 75 PRLRWTPELHLRFVHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 128
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MKRESSTEDS KTSPPNQNEF EEEEDEDEEE DDLETEENSK AQGRTRSSSS NSTVEENGKK 60
TNSGSVRQYI RSKTPRLRWT PELHLRFVHA VERLGGQDRA TPKLVLQLMN IKGLSIAHVK 120
SHLQMYRSKK TDDPNQTVSV DGRFLLENGD HHIFNLTQLP RLQGFNQTSS SSLRYENALW 180
NRQVNPLYNP YNINMGVGSS IRRHGQLFSW NKSLDIEKNQ NRQNQRLWPT QSGITPAKQN 240
LLITLPIDRN RDKDEIVNRR SEQEMMGAKE NRGKWWMSEH VAINTCSNKI RIQDSEINLD 300
LNLSPKTTRE NHPKRLKAEQ VGDLLTLSLF SSTSTSEENK ASTLDLTL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 3e-17 | 76 | 130 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 3e-17 | 76 | 130 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 3e-17 | 76 | 130 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 3e-17 | 76 | 130 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975445 | 2e-75 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |
