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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_00175.1_g00001.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
GATA |
| Protein Properties |
Length: 326aa MW: 36007.4 Da PI: 6.8701 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00175.1_g00001.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 59.2 | 5.5e-19 | 244 | 277 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C++C++ kTp+WR gp g+ktLCnaCG++y++ +
Sme2.5_00175.1_g00001.1 244 CTHCQVQKTPQWRAGPLGPKTLCNACGVRYKSGR 277
*******************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MELIEARALK SSFLSDMAMK NTQQVFLDDI WCVTGINNGG SEDFSVDDLL DFSDKDFKDP 60
ELHEDDEKTS FSGSSQKRNY SQDSTFSGME SFGSLDGQLP IPVDELENLE WLSQFVDDTS 120
SEFSLLYPAG SLKDKTGGFP EFRPEPVVRP VGKKMRVPCF PMPFPVKPRS KRARPAGRTW 180
SFPTSTVSGD SSSPTSSSYG SSPFPSGFFT NPVCDGDVFC SVEKPPLKKS KKNSSADTGS 240
GRRCTHCQVQ KTPQWRAGPL GPKTLCNACG VRYKSGRLFP EYRPACSPTF SMEVHSNSHR 300
KVLEMRRKKE TGELIDSGLA SMVSTC
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