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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_00125.1_g00020.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
Trihelix |
| Protein Properties |
Length: 330aa MW: 37457.4 Da PI: 5.3692 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00125.1_g00020.1 | genome | EGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 72.3 | 8.3e-23 | 35 | 126 | 1 | 83 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77
rWt+qe+l+Li++++ eer rg+ + +p+W++vs+++r++g r+p+qC+++w+n+ ++kkik+++ + + s+s
Sme2.5_00125.1_g00020.1 35 RWTRQETLVLIQGKKIAEERAHRGRkstsvfgsdKPEPKWDSVSSYCRQHGADRGPVQCRKRWSNMISDFKKIKTWDTQINGSSES 120
8**************999999987556677777699******************************************99766666 PP
trihelix 78 tcpyfd 83
+ +
Sme2.5_00125.1_g00020.1 121 YWIISN 126
776555 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MTLGSAEMNE NTATLADGQQ KLTEDGRSKT PRHSRWTRQE TLVLIQGKKI AEERAHRGRK 60
STSVFGSDKP EPKWDSVSSY CRQHGADRGP VQCRKRWSNM ISDFKKIKTW DTQINGSSES 120
YWIISNDLRR ERRLPGSFDR EVYNVLDGKD FTAEAYQLAL VTITTDEKLD YGIETVEEEE 180
AEEVEEENDN VSHTGEYTME DDVSPAAEEV GSNPLKEHIV KDKKAKSIPS PTPRSGTVEG 240
EQPGSDFWNS PMFHDRVKKR RQSPDGCIDG NLGCKLLKTL ERNTNMLHSQ LDAQMENRQR 300
DREQQNEHTD SLIAALNKVA DAVARVADKM
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